Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885356.1_cds_XP_016439338.1_34904
CDS Infomation

[gene=LOC107765227] [db_xref=GeneID:107765227] [protein=cyclase-associated protein 1-like] [protein_id=XP_016439338.1] [location=complement(join(74416..74502,75532..75675,75786..75842,75946..76001,76108..76217,76401..76548,76625..76934,78986..79050,79122..79290,80245..80523))] [gbkey=CDS]
Sequence

ATGGATGAGAAGTTGATACAGCGATTGGAGTCCGCCGTCACACGGCTTGAGGCACTGTCA
GCCGGCGGCTTCAGCGGAGGAGTTTCGCCGGGGGAGGGCGAAGCTGCGGCTGTTTTAGAT
CCGTCGATTATTGCCTTTGACGATCTGAGGTCTCAGTTCGTCGGGAGAGTTCGAAGTGCT
GCAGAGAAGATTGGAGGGCGAGTTTTGGATGTGACAAAGATTGTTGAGGAGGCTTTTGAA
GCTCAGCGTGAACTTCTTATCAAAATCAAGCAGACTCAGAAACCTGACATGTCTGGTTTG
GCTGAATTTCTTAAGCCTTTGAATGATGTGATTGTGAAAGCTACAAAAATGATAGAAGGA
CGGCGACCTGATTTCTTCAATCACTTGAAGGCTGCTGTTGATAGTCTGACAGCCCTGGCA
TGGATAGCTTACACTGGAAAGGATTGTGGTTTGAGTATGCCTATTGCACACGTGGAAGAA
AGTTGGCAGATGGCTGAATTTTACAATAACAAGGTCCTTGTGGAGTTCCGAAACAAAGAC
TCGAATCATGTTGAATGGGCAAAAGCCTTGAAAGAGCTTTATCTCCCTGGCTTGCGAGAT
TATGTTAAGAGTCACTATCCGTTGGGTCCTGTATGGAGTGCTACAGGGAAAGTTGCTGTA
TCTGCACCACCAAAAGCTCCCACACCAAGTGCTCCCATGCCTCCTCCTCCACCGCCAGCT
TCTTTGTTCAGCTCTGAATCTCCCCAGGCTTCATCATCACGTCAAACGAAAGGGATGACA
GCTGTTTTTGATGAAATTAATTCGGGAAAGCCAGTGACTTCTGGATTGAGAAAGGTGACA
GATGATATGAAGACAAAGAACTGGGCAGACAGAACTGGTGTCATTAGTGCAGGAGGAAAG
GAAGGTCATGTTAGCTCACCCTCTTTTTCTAAAGCTGGACCTCCGAAATTGGAGCTTCAG
ATGGGTCGTAAATGGGTGGTCGAGAATCATATAGGAAAAAAGAATCTAGTCATTGATGAT
TGCGATGCAAAGCAATCTGTTTATATTTTTGGTTGCAAAGATTCAGTTCTGCAGATCCAA
GGGAAAGTCAACAACATAACAGTTGATAAGTGCACTAAGATGGGAGTTGTATTCACGGAT
GTTGTGGCAGCTTGTGAGGTTGTCAACTGCAATGGTGTGGAGGTGCAATGTCAGGGTTCA
GCACCAACAATTTCAGTCGATAATACAACTGGATGCCAGTTGTACTTGAGCAAAGGTTCT
TTGGAGACTTCCATTACAACAGCCAAGTCAAGTGAAATCAATGTTTTGGTTCCTGATGCT
GGACCTGATAGTGATTGGGGTGAGCATGCTTTGCCACAGCAATTTTCTCATGTATACAAG
AATGGCCAATTTGTGACGACACCTGTCTCCCATTCTGGAGGTTAA

Peptide Sequence

PEP ID

XP_016439338.1
PEP Infomation

PREDICTED: cyclase-associated protein 1-like [Nicotiana tabacum]
Sequence

MDEKLIQRLESAVTRLEALSAGGFSGGVSPGEGEAAAVLDPSIIAFDDLRSQFVGRVRSA
AEKIGGRVLDVTKIVEEAFEAQRELLIKIKQTQKPDMSGLAEFLKPLNDVIVKATKMIEG
RRPDFFNHLKAAVDSLTALAWIAYTGKDCGLSMPIAHVEESWQMAEFYNNKVLVEFRNKD
SNHVEWAKALKELYLPGLRDYVKSHYPLGPVWSATGKVAVSAPPKAPTPSAPMPPPPPPA
SLFSSESPQASSSRQTKGMTAVFDEINSGKPVTSGLRKVTDDMKTKNWADRTGVISAGGK
EGHVSSPSFSKAGPPKLELQMGRKWVVENHIGKKNLVIDDCDAKQSVYIFGCKDSVLQIQ
GKVNNITVDKCTKMGVVFTDVVAACEVVNCNGVEVQCQGSAPTISVDNTTGCQLYLSKGS
LETSITTAKSSEINVLVPDAGPDSDWGEHALPQQFSHVYKNGQFVTTPVSHSGG

Transcript Sequence

Gene sequence data has not been registered.